Genome Analysis

Gene Expression Analysis

• CGED: Cancer Gene Expression Database
  Search for gene expression profiles and accompanying clinical information on human cancers genes
• DRAGON
  Tools for the annotation and visualization of microarray data
• EMBL-EBI ArrayExpress
  Search this public repository for microarray data
• EMBL-EBI Expression Profiler
  Analyze microarray gene expression and other functional genomics-related data
• ExpressYourself
  Process your microarray data through this platform
• GeneMAPP
  Enable the visualization of gene expression and genomic data on maps representing biological pathways and groupings of genes
• GeneX
  A gene expression database system with an integrated toolset that enables researchers to store, analyze, and communicate their data
• GeneXPress
  Visualize and analyze gene expression data, integrating clustering, gene annotation, and sequence information
• GXD Mouse Gene Expression Database
  Search for gene expression information
• NCBI GEO
  Search, submit, and store high-throughput gene expression data
• NHGRI Microarray Project
  Collaborative intradisciplinary DNA microarray project to develop public methodological resource and information about cDNA
• SAGE Genie
  Provides a powerful set of tools to provide highly intuitive visual displays of Serial Analysis of Gene Expression (SAGE) data from cells and tissues
• SNOMAD
  Tools directed at the normalization and standardization of DNA microarray data
• Stanford Microarray Database
  Search for raw and normalized data from microarray experiments, as well as their corresponding image files